Post-Doctoral & Graduate Work
- Padilla-Nash HM, McNeil NE, Yi M, Nguyen QT, Hu Y, Wangsa D, Mack DL, Hummon AB, Case C, Cardin E, Stephens R, Difilippantonio MJ, Ried T. Aneuploidy, Oncogene Amplification, and Epithelial to Mesenchymal Transition Define Spontaneous Transformation of Murine Epithelial Cells."Carcinogenesis. 2013 Mar 15;73(6);2013-13.
- Camps J, Pitt JJ, Emons G, Hummon AB, Case CM, Grade M, Jones TL, Nguyen QT, Ghadimi BM, Beissbarth T, Difilippantonio MJ, Caplen NJ, Ried T. ”Genetic Amplification of the NOTCH Modulator LNX2 Upregulates the WNT/β-Catenin Pathway in Colorectal Cancer.” Cancer Res. 2013 Mar 15;73(6):2003-13.
- Grade, M.; Hummon, A.B.; Emons, G.; Camps, J.; Spitzner, M.; Hoermann, P.; Gaedcke, J.; Ebner, R.; Becker, H.; Ghadimi, B.M.; Beissbarth, T.; Difilippantonio, M.J.; Caplen, N.J.; Ried, T. “Identification and Validation of NOL5A and RPS2 as Potential Therapeutic Targets in Colorectal Cancer using a Functional Genomics Approach.” Int J. Cancer. March 2011 128(5):1069-79.
- Camps, J.; Nguyen, Q.T.; Padilla-Nash, H.M.; Knutsen, T.; McNeil, N.E.; Wangsa, D.; Hummon, A.B.; Grade, M.; Ried, T.; Difilippantonio, M.J. “Integrative genomics reveals mechanisms of copy number alterations responsible for transcriptional deregulation in colorectal cancer.” Genes Chromosomes Cancer. 2009 Nov;48(11);1002-17.
- Camps, J.; Grade, M.; Nguyen, Q.T.; Hörmann, P.; Becker, S.; Hummon, A.B.; Rodriguez, V.; Chandrasekharappa, S.; Chen, Y.; Difilippantonio, M.J.; Becker, H.; Ghadimi, B.M.; Ried, T. “Chromosome breakpoints in primary colon cancer cluster at sites of structural variants in the genome.” Cancer Res. 2008 Mar 1;68(5):1284-95.
- Hummon, A.B.; Martin, S.E.; Caplen, N.J. “RNAi screens: Going right to the target.” Screening-Trends in Drug Discovery 4, 2 (2007).
- Hummon, A.B.; Lim, S.R.; Difilippantonio, M.J.; Ried, T. “Isolation and solubilization of proteins after TRIzol extraction of RNA and DNA from patient material following prolonged storage.” Biotechniques 42, 467 (2007).
- Grade, M.; Hörmann, P.; Becker, S.; Hummon, A.B.; Wangsa, D.; Varma, S.; Simon, R.; Liersch, T.; Becker, H.; Difilippantonio, M.J.; Ghadimi, B.M.; Ried, T. “Gene Expression Profiling Reveals a Massive, Aneuploidy-Dependent Transcriptional Deregulation and Distinct Differences between Lymph Node Negative and Positive Colon Carcinomas.” Cancer Res. 67, 41 (2007).
- Hummon, A.B.; Richmond, T.A.; Amare, A.; Ewing, M.A.; Verleyen, P.; Baggerman, G.; Schoofs, L.; Southey, B.; Rodriguez-Zas, S.L.; Robinson, G.E.; Sweedler, J.V. “From the Genome to the Proteome: Uncovering Peptides in the Apis Brain.” Science 314, 647 (2006).
- The Honeybee Genome Sequencing Consortium. "Insights into social insects from the genome of the honeybee Apis mellifera." Nature 443, 931 (2006).
- Amare, A.; Hummon, A.B.; Southey, B.R.; Zimmerman, T.A.; Rodriguez-Zas, S.L.; Sweedler, J.V. “Bridging Neuropeptidomics and Genomics with Bioinformatics: Prediction of Mammalian Neuropeptide Prohormone Processing.” J. Proteome Res. 5, 1162 (2006).
- Hummon, A.B.; Amare, A.; Sweedler, J.V. “Discovering New Invertebrate Neuropeptides using Mass Spectrometry.” Mass Spectrom. Rev. 25, 77 (2006).
- Stuart, J.N.; Hummon, A.B.; Sweedler, J.V. “The Chemistry of Thought: Neurotransmitters in the Brain.” Anal. Chem. 76, 121A (2004).
- Cummins, S.F.; Nichols, A.; Amare, A.; Hummon, A.B.; Sweedler, J.V.; Nagle, G.T. “Novel Candidate Protein Pheromones in Aplysia: Identification, Characterization, Expression, and Biological Activity.” J. Biol. Chem. 279, 25614 (2004).
- Page, J.S.; Hummon, A.B.; Sweedler, J.V. “Single Cell Peptide Analysis with MALDI-MS” for Encyclopedia of Mass Spectrometry. Vol 2, Biological Applications. Eds. R. Caprioli and M. Gross. 2004.
- Hummon, A.B.; Hummon, N.P.; Corbin, R.W.; Li, L.; Vilim, F.S.; Weiss, K.R.; Sweedler, J.V. “From Precursor to Final Peptides: A Statistical Sequence-Based Approach to Predicting Prohormone Processing.” J. Proteome Res. 2, 650 (2003).
- Hummon, A.B.; Corbin, R.W.; Sweedler, J.V. “Discovering New Neuropeptides using Single Cell Mass Spectrometry.” Trends Anal. Chem. 22, 515 (2003).
- Hummon, A.B.; Huang, H.; Kelley, W.P.; Sweedler. J.V. “A Novel Prohormone Processing Site in Aplysia californica: the Leu-Leu Rule.” J. Neurochem. 82, 1398 (2002).